Merge branch 'master' into 'main' (d32a44a8) · Commits · holooligo / Omnicrobe database · GitLab

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d32a44a8

Commit d32a44a8 authored 3 years ago by Sandra Derozier

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Merge branch 'master' into 'main'

Initial commit

See merge request omnicrobe/omnicrobe-database!1

parents 3ff07b7c a6a5d0dc

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.gitignore 11 additions, 0 deletions

.gitignore
Snakefile 260 additions, 0 deletions

Snakefile
config.yaml 88 additions, 0 deletions

config.yaml
create.sql 165 additions, 0 deletions

create.sql
environment.yml 78 additions, 0 deletions

environment.yml
scripts/addElements.py 109 additions, 0 deletions

scripts/addElements.py
scripts/addListElement.py 66 additions, 0 deletions

scripts/addListElement.py
scripts/addListTaxon.py 65 additions, 0 deletions

scripts/addListTaxon.py
scripts/addRelations.py 151 additions, 0 deletions

scripts/addRelations.py
scripts/addTaxonQPS.py 86 additions, 0 deletions

scripts/addTaxonQPS.py
scripts/checkTaxon.py 65 additions, 0 deletions

scripts/checkTaxon.py
scripts/cleaning.py 50 additions, 0 deletions

scripts/cleaning.py
scripts/counting.py 100 additions, 0 deletions

scripts/counting.py
scripts/ontobiotope.py 82 additions, 0 deletions

scripts/ontobiotope.py
scripts/versions.py 48 additions, 0 deletions

scripts/versions.py

with 1424 additions and 0 deletions

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